I noticed at our local Target store, the pegs seem to be dwindling down pretty good at this point. Unless they start getting more shipments (I haven't seen any 08 figures at this particular store), things will be cleared out before too long. That said, the pegwarmers there have mainly been Elis Herlot, the ROTS clone, and a couple Jerjerrods. Its getting pretty picked over there though. Other Targets in town have the same - mainly Legends (Sandtroopers and clones surprisingly, with some others), and I've seen a little bit of the 08 stuff there.
Wal-Mart still has a peg or two each full of the Naboo soldier and Jerjerrod. They also are just packed with Legends, mainly Biker Scouts the last time I was there (though it has been a little while now).
TRU has a ton of stuff right now, again mostly Legends. They also have a peg full of the Holo Vader and some of the others from that repaint wave. They also have pegs full of Elis Herlot and Miyoom Onith. Overall, throughout town it seems like its Legends warming things up more than anything else, although none of the newest (Shadow Stormtrooper/Zev/etc) releases.